Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CFHR3Q02985 ABALON-201ENST00000629058 1903 ntBASIC14.01□□□□□ -0.17
CFHR3Q02985 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 FLJ13224-201ENST00000313737 1514 ntBASIC14□□□□□ -0.17
CFHR3Q02985 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CFHR3Q02985 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14□□□□□ -0.17
CFHR3Q02985 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14□□□□□ -0.17
CFHR3Q02985 TSPY19P-201ENST00000418461 509 ntBASIC14□□□□□ -0.17
CFHR3Q02985 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14□□□□□ -0.17
CFHR3Q02985 TSPY18P-201ENST00000441642 509 ntBASIC14□□□□□ -0.17
CFHR3Q02985 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 MINOS1P3-201ENST00000457048 203 ntBASIC14□□□□□ -0.17
CFHR3Q02985 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14□□□□□ -0.17
CFHR3Q02985 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14□□□□□ -0.17
CFHR3Q02985 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14□□□□□ -0.17
CFHR3Q02985 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14□□□□□ -0.17
CFHR3Q02985 AC099336.1-202ENST00000602961 463 ntBASIC14□□□□□ -0.17
CFHR3Q02985 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14□□□□□ -0.17
CFHR3Q02985 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CFHR3Q02985 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CFHR3Q02985 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 AL354751.1-201ENST00000412768 1863 ntBASIC13.99□□□□□ -0.17
CFHR3Q02985 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CFHR3Q02985 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CFHR3Q02985 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.99□□□□□ -0.17
CFHR3Q02985 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.99□□□□□ -0.17
CFHR3Q02985 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.99□□□□□ -0.17
CFHR3Q02985 POM121L3P-201ENST00000419331 1163 ntBASIC13.99□□□□□ -0.17
CFHR3Q02985 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.99□□□□□ -0.17
CFHR3Q02985 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.99□□□□□ -0.17
CFHR3Q02985 FOSL1P1-201ENST00000511041 816 ntBASIC13.99□□□□□ -0.17
CFHR3Q02985 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.99□□□□□ -0.17
CFHR3Q02985 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 KRT126P-201ENST00000549467 1181 ntBASIC13.99□□□□□ -0.17
CFHR3Q02985 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.99□□□□□ -0.17
CFHR3Q02985 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.99□□□□□ -0.17
CFHR3Q02985 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.99□□□□□ -0.17
CFHR3Q02985 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CFHR3Q02985 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CFHR3Q02985 AC135050.7-201ENST00000624508 2218 ntBASIC13.99□□□□□ -0.17
CFHR3Q02985 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.99□□□□□ -0.17
CFHR3Q02985 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CFHR3Q02985 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms