Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.97■□□□□ 0.47
CSNK1DP48730 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.97■□□□□ 0.47
CSNK1DP48730 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CSNK1DP48730 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CSNK1DP48730 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSNK1DP48730 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.97■□□□□ 0.47
CSNK1DP48730 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.96■□□□□ 0.47
CSNK1DP48730 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
CSNK1DP48730 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.96■□□□□ 0.47
CSNK1DP48730 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.96■□□□□ 0.47
CSNK1DP48730 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.96■□□□□ 0.47
CSNK1DP48730 KRT126P-201ENST00000549467 1181 ntBASIC17.96■□□□□ 0.47
CSNK1DP48730 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.96■□□□□ 0.47
CSNK1DP48730 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1DP48730 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1DP48730 BX276092.7-203ENST00000637198 1536 ntBASIC17.96■□□□□ 0.47
CSNK1DP48730 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.96■□□□□ 0.47
CSNK1DP48730 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CSNK1DP48730 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CSNK1DP48730 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CSNK1DP48730 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.96■□□□□ 0.46
CSNK1DP48730 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.95■□□□□ 0.46
CSNK1DP48730 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 NOC2LP1-202ENST00000452600 2235 ntBASIC17.95■□□□□ 0.46
CSNK1DP48730 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CSNK1DP48730 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 NEFHP1-201ENST00000412845 2629 ntBASIC17.95■□□□□ 0.46
CSNK1DP48730 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
CSNK1DP48730 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.95■□□□□ 0.46
CSNK1DP48730 NUS1P2-201ENST00000417358 873 ntBASIC17.95■□□□□ 0.46
CSNK1DP48730 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
CSNK1DP48730 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1DP48730 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.95■□□□□ 0.46
CSNK1DP48730 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1DP48730 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 AL591684.3-201ENST00000605187 298 ntBASIC17.95■□□□□ 0.46
CSNK1DP48730 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CSNK1DP48730 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1DP48730 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1DP48730 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.95■□□□□ 0.46
CSNK1DP48730 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CSNK1DP48730 AC009949.1-201ENST00000623048 1830 ntBASIC17.95■□□□□ 0.46
CSNK1DP48730 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1DP48730 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1DP48730 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CSNK1DP48730 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CSNK1DP48730 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CSNK1DP48730 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CSNK1DP48730 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.94■□□□□ 0.46
CSNK1DP48730 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.94■□□□□ 0.46
CSNK1DP48730 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CSNK1DP48730 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.94■□□□□ 0.46
CSNK1DP48730 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 AL450487.1-201ENST00000426799 995 ntBASIC17.94■□□□□ 0.46
CSNK1DP48730 AC103564.2-201ENST00000432853 1299 ntBASIC17.94■□□□□ 0.46
CSNK1DP48730 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.94■□□□□ 0.46
CSNK1DP48730 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1DP48730 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms