Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CLCN1P35523 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
CLCN1P35523 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCN1P35523 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.43■□□□□ 0.86
CLCN1P35523 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCN1P35523 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLCN1P35523 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.43■□□□□ 0.86
CLCN1P35523 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CLCN1P35523 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CLCN1P35523 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 TSPY21P-201ENST00000433481 731 ntBASIC20.43■□□□□ 0.86
CLCN1P35523 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.43■□□□□ 0.86
CLCN1P35523 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCN1P35523 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CLCN1P35523 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.43■□□□□ 0.86
CLCN1P35523 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.43■□□□□ 0.86
CLCN1P35523 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.43■□□□□ 0.86
CLCN1P35523 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CLCN1P35523 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.43■□□□□ 0.86
CLCN1P35523 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CLCN1P35523 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CLCN1P35523 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCN1P35523 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.42■□□□□ 0.86
CLCN1P35523 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.42■□□□□ 0.86
CLCN1P35523 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 AC098590.1-201ENST00000468126 897 ntBASIC20.42■□□□□ 0.86
CLCN1P35523 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.42■□□□□ 0.86
CLCN1P35523 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CLCN1P35523 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.42■□□□□ 0.86
CLCN1P35523 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN1P35523 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CLCN1P35523 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN1P35523 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CLCN1P35523 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN1P35523 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.41■□□□□ 0.86
CLCN1P35523 KSR1P1-201ENST00000446298 240 ntBASIC20.41■□□□□ 0.86
CLCN1P35523 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN1P35523 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN1P35523 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.41■□□□□ 0.86
CLCN1P35523 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN1P35523 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 AC132872.4-202ENST00000622924 2756 ntBASIC20.41■□□□□ 0.86
CLCN1P35523 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN1P35523 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
CLCN1P35523 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLCN1P35523 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN1P35523 AL603756.1-201ENST00000606511 2163 ntBASIC20.41■□□□□ 0.86
CLCN1P35523 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLCN1P35523 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN1P35523 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN1P35523 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms