Protein–RNA interactions for Protein: P25024

CXCR1, C-X-C chemokine receptor type 1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR1P25024 AC092597.1-201ENST00000487352 616 ntBASIC16.39■□□□□ 0.21
CXCR1P25024 DUTP2-201ENST00000519164 463 ntBASIC16.39■□□□□ 0.21
CXCR1P25024 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR1P25024 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.39■□□□□ 0.21
CXCR1P25024 RN7SL850P-201ENST00000579959 291 ntBASIC16.39■□□□□ 0.21
CXCR1P25024 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.39■□□□□ 0.21
CXCR1P25024 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.39■□□□□ 0.21
CXCR1P25024 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.39■□□□□ 0.21
CXCR1P25024 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR1P25024 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR1P25024 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CXCR1P25024 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR1P25024 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CXCR1P25024 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR1P25024 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CXCR1P25024 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR1P25024 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.39■□□□□ 0.21
CXCR1P25024 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR1P25024 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR1P25024 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR1P25024 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
CXCR1P25024 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR1P25024 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CXCR1P25024 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR1P25024 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 AC132938.6-201ENST00000623828 1655 ntBASIC16.38■□□□□ 0.21
CXCR1P25024 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR1P25024 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 RCN1P1-201ENST00000400413 996 ntBASIC16.38■□□□□ 0.21
CXCR1P25024 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.38■□□□□ 0.21
CXCR1P25024 TMPOP1-202ENST00000424642 1267 ntBASIC16.38■□□□□ 0.21
CXCR1P25024 AC112907.2-201ENST00000448639 330 ntBASIC16.38■□□□□ 0.21
CXCR1P25024 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR1P25024 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.38■□□□□ 0.21
CXCR1P25024 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
CXCR1P25024 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CXCR1P25024 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR1P25024 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CXCR1P25024 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR1P25024 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR1P25024 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.37■□□□□ 0.21
CXCR1P25024 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CXCR1P25024 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 KRT18P55-202ENST00000578578 1546 ntBASIC16.37■□□□□ 0.21
CXCR1P25024 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.37■□□□□ 0.21
CXCR1P25024 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.37■□□□□ 0.21
CXCR1P25024 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CXCR1P25024 KRT18P38-201ENST00000449496 1282 ntBASIC16.37■□□□□ 0.21
CXCR1P25024 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.37■□□□□ 0.21
CXCR1P25024 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.37■□□□□ 0.21
CXCR1P25024 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.37■□□□□ 0.21
CXCR1P25024 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.37■□□□□ 0.21
CXCR1P25024 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCR1P25024 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCR1P25024 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CXCR1P25024 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR1P25024 CROCCP1-201ENST00000426910 5675 ntBASIC16.36■□□□□ 0.21
CXCR1P25024 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR1P25024 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR1P25024 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR1P25024 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CXCR1P25024 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCR1P25024 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms