Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NTF3P20783 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.68□□□□□ -0.22
NTF3P20783 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.68□□□□□ -0.22
NTF3P20783 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NTF3P20783 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 AC112777.1-201ENST00000540175 1423 ntBASIC13.68□□□□□ -0.22
NTF3P20783 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
NTF3P20783 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.68□□□□□ -0.22
NTF3P20783 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.68□□□□□ -0.22
NTF3P20783 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.68□□□□□ -0.22
NTF3P20783 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.68□□□□□ -0.22
NTF3P20783 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NTF3P20783 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NTF3P20783 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NTF3P20783 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.68□□□□□ -0.22
NTF3P20783 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NTF3P20783 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NTF3P20783 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
NTF3P20783 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.67□□□□□ -0.22
NTF3P20783 AL160286.2-201ENST00000567150 934 ntBASIC13.67□□□□□ -0.22
NTF3P20783 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 AL121761.2-201ENST00000598007 1648 ntBASIC13.67□□□□□ -0.22
NTF3P20783 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.67□□□□□ -0.22
NTF3P20783 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.67□□□□□ -0.22
NTF3P20783 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.67□□□□□ -0.22
NTF3P20783 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NTF3P20783 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NTF3P20783 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NTF3P20783 LINC00554-201ENST00000564841 3011 ntBASIC13.66□□□□□ -0.22
NTF3P20783 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NTF3P20783 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NTF3P20783 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.66□□□□□ -0.22
NTF3P20783 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.66□□□□□ -0.22
NTF3P20783 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms