Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SMPD1P17405 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 AL020989.1-201ENST00000422979 469 ntBASIC19.87■□□□□ 0.77
SMPD1P17405 DNAJB3-201ENST00000446806 729 ntBASIC19.87■□□□□ 0.77
SMPD1P17405 KRT18P2-201ENST00000447938 1258 ntBASIC19.87■□□□□ 0.77
SMPD1P17405 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.87■□□□□ 0.77
SMPD1P17405 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 MIR3687-2-201ENST00000577708 61 ntBASIC19.87■□□□□ 0.77
SMPD1P17405 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 MIR3687-1-201ENST00000614492 61 ntBASIC19.87■□□□□ 0.77
SMPD1P17405 AL589182.2-201ENST00000619332 1049 ntBASIC19.87■□□□□ 0.77
SMPD1P17405 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.87■□□□□ 0.77
SMPD1P17405 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMPD1P17405 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.87■□□□□ 0.77
SMPD1P17405 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.86■□□□□ 0.77
SMPD1P17405 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.86■□□□□ 0.77
SMPD1P17405 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
SMPD1P17405 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
SMPD1P17405 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 RPS8P6-201ENST00000426177 609 ntBASIC19.86■□□□□ 0.77
SMPD1P17405 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.86■□□□□ 0.77
SMPD1P17405 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.86■□□□□ 0.77
SMPD1P17405 AC002347.1-201ENST00000569543 541 ntBASIC19.86■□□□□ 0.77
SMPD1P17405 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.86■□□□□ 0.77
SMPD1P17405 AP001160.2-201ENST00000596071 487 ntBASIC19.86■□□□□ 0.77
SMPD1P17405 AC004706.3-202ENST00000621574 984 ntBASIC19.86■□□□□ 0.77
SMPD1P17405 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SMPD1P17405 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.86■□□□□ 0.77
SMPD1P17405 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
SMPD1P17405 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 AC148477.5-201ENST00000625164 1645 ntBASIC19.86■□□□□ 0.77
SMPD1P17405 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.86■□□□□ 0.77
SMPD1P17405 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMPD1P17405 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.85■□□□□ 0.77
SMPD1P17405 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMPD1P17405 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMPD1P17405 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SMPD1P17405 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.85■□□□□ 0.77
SMPD1P17405 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMPD1P17405 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.85■□□□□ 0.77
SMPD1P17405 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.85■□□□□ 0.77
SMPD1P17405 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.85■□□□□ 0.77
SMPD1P17405 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.85■□□□□ 0.77
SMPD1P17405 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
SMPD1P17405 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.85■□□□□ 0.77
SMPD1P17405 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMPD1P17405 AL096828.2-201ENST00000567259 1965 ntBASIC19.84■□□□□ 0.77
SMPD1P17405 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.84■□□□□ 0.77
SMPD1P17405 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SMPD1P17405 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 AC006504.4-201ENST00000592118 1568 ntBASIC19.84■□□□□ 0.77
SMPD1P17405 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.84■□□□□ 0.77
SMPD1P17405 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SMPD1P17405 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.84■□□□□ 0.77
SMPD1P17405 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.84■□□□□ 0.77
SMPD1P17405 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.84■□□□□ 0.77
SMPD1P17405 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.84■□□□□ 0.77
SMPD1P17405 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.84■□□□□ 0.77
SMPD1P17405 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.84■□□□□ 0.77
SMPD1P17405 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.84■□□□□ 0.77
SMPD1P17405 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.84■□□□□ 0.77
SMPD1P17405 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SMPD1P17405 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMPD1P17405 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms