Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.61■□□□□ 0.73
CLTAP09496 MIR3652-201ENST00000579335 131 ntBASIC19.61■□□□□ 0.73
CLTAP09496 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLTAP09496 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CLTAP09496 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.61■□□□□ 0.73
CLTAP09496 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.61■□□□□ 0.73
CLTAP09496 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CLTAP09496 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.61■□□□□ 0.73
CLTAP09496 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLTAP09496 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLTAP09496 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.6■□□□□ 0.73
CLTAP09496 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.6■□□□□ 0.73
CLTAP09496 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 AP000997.3-201ENST00000623333 2250 ntBASIC19.6■□□□□ 0.73
CLTAP09496 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 AL845331.1-201ENST00000424978 1190 ntBASIC19.6■□□□□ 0.73
CLTAP09496 AC246785.2-201ENST00000432512 513 ntBASIC19.6■□□□□ 0.73
CLTAP09496 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLTAP09496 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.6■□□□□ 0.73
CLTAP09496 CLEC4GP1-201ENST00000596555 870 ntBASIC19.6■□□□□ 0.73
CLTAP09496 Z69720.1-201ENST00000601483 472 ntBASIC19.6■□□□□ 0.73
CLTAP09496 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.6■□□□□ 0.73
CLTAP09496 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.6■□□□□ 0.73
CLTAP09496 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.6■□□□□ 0.73
CLTAP09496 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 AL390961.4-201ENST00000623958 2535 ntBASIC19.6■□□□□ 0.73
CLTAP09496 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLTAP09496 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.6■□□□□ 0.73
CLTAP09496 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.59■□□□□ 0.73
CLTAP09496 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CLTAP09496 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLTAP09496 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CLTAP09496 MTCL1P1-201ENST00000446207 792 ntBASIC19.59■□□□□ 0.73
CLTAP09496 AC012615.1-201ENST00000565797 1299 ntBASIC19.59■□□□□ 0.73
CLTAP09496 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLTAP09496 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CLTAP09496 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.59■□□□□ 0.73
CLTAP09496 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLTAP09496 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLTAP09496 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLTAP09496 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.59■□□□□ 0.73
CLTAP09496 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLTAP09496 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLTAP09496 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.58■□□□□ 0.73
CLTAP09496 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CLTAP09496 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.58■□□□□ 0.73
CLTAP09496 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.58■□□□□ 0.73
CLTAP09496 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLTAP09496 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLTAP09496 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.58■□□□□ 0.73
CLTAP09496 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLTAP09496 AL096828.2-201ENST00000567259 1965 ntBASIC19.58■□□□□ 0.73
CLTAP09496 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.58■□□□□ 0.72
CLTAP09496 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.58■□□□□ 0.72
CLTAP09496 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLTAP09496 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.58■□□□□ 0.72
CLTAP09496 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.58■□□□□ 0.72
CLTAP09496 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.58■□□□□ 0.72
CLTAP09496 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.58■□□□□ 0.72
CLTAP09496 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.58■□□□□ 0.72
CLTAP09496 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLTAP09496 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.58■□□□□ 0.72
CLTAP09496 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLTAP09496 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.58■□□□□ 0.72
CLTAP09496 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms