Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN1O60925 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 AC245052.3-201ENST00000450182 901 ntBASIC16.05■□□□□ 0.16
PFDN1O60925 AP005435.1-201ENST00000529293 1178 ntBASIC16.05■□□□□ 0.16
PFDN1O60925 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN1O60925 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN1O60925 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PFDN1O60925 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PFDN1O60925 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN1O60925 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN1O60925 AL138688.1-201ENST00000624851 1594 ntBASIC16.04■□□□□ 0.16
PFDN1O60925 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PFDN1O60925 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 AC009237.3-201ENST00000393279 1427 ntBASIC16.04■□□□□ 0.16
PFDN1O60925 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN1O60925 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN1O60925 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.04■□□□□ 0.16
PFDN1O60925 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.04■□□□□ 0.16
PFDN1O60925 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.04■□□□□ 0.16
PFDN1O60925 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PFDN1O60925 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PFDN1O60925 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.04■□□□□ 0.16
PFDN1O60925 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 PHGDH-210ENST00000641115 1638 ntBASIC16.04■□□□□ 0.16
PFDN1O60925 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PFDN1O60925 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN1O60925 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN1O60925 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN1O60925 AL096828.2-201ENST00000567259 1965 ntBASIC16.04■□□□□ 0.16
PFDN1O60925 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PFDN1O60925 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PFDN1O60925 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PFDN1O60925 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PFDN1O60925 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN1O60925 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.03■□□□□ 0.16
PFDN1O60925 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 AL499627.1-201ENST00000569373 2188 ntBASIC16.03■□□□□ 0.16
PFDN1O60925 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.03■□□□□ 0.16
PFDN1O60925 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 AC097376.2-205ENST00000610159 5334 ntBASIC16.03■□□□□ 0.16
PFDN1O60925 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PFDN1O60925 AC099791.2-201ENST00000605725 427 ntBASIC16.03■□□□□ 0.16
PFDN1O60925 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PFDN1O60925 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.03■□□□□ 0.16
PFDN1O60925 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PFDN1O60925 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN1O60925 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PFDN1O60925 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.02■□□□□ 0.16
PFDN1O60925 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN1O60925 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.02■□□□□ 0.16
PFDN1O60925 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PFDN1O60925 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms