Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 AC131212.4-201ENST00000623606 975 ntBASIC17.01■□□□□ 0.31
AP4S1Q9Y587 AL162727.3-201ENST00000635661 2787 ntBASIC17.01■□□□□ 0.31
AP4S1Q9Y587 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.01■□□□□ 0.31
AP4S1Q9Y587 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 AC009102.3-201ENST00000623118 1491 ntBASIC17■□□□□ 0.31
AP4S1Q9Y587 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
AP4S1Q9Y587 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17■□□□□ 0.31
AP4S1Q9Y587 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17■□□□□ 0.31
AP4S1Q9Y587 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
AP4S1Q9Y587 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP4S1Q9Y587 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17■□□□□ 0.31
AP4S1Q9Y587 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 MIR663A-201ENST00000385250 93 ntBASIC16.99■□□□□ 0.31
AP4S1Q9Y587 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.99■□□□□ 0.31
AP4S1Q9Y587 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 AC091390.4-202ENST00000476426 537 ntBASIC16.99■□□□□ 0.31
AP4S1Q9Y587 AC073111.5-205ENST00000641717 521 ntBASIC16.99■□□□□ 0.31
AP4S1Q9Y587 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
AP4S1Q9Y587 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 AL163051.1-201ENST00000569214 1512 ntBASIC16.98■□□□□ 0.31
AP4S1Q9Y587 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 MIR149-201ENST00000384879 89 ntBASIC16.98■□□□□ 0.31
AP4S1Q9Y587 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 UNC93B4-201ENST00000505679 747 ntBASIC16.98■□□□□ 0.31
AP4S1Q9Y587 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 AC080038.1-201ENST00000611274 1154 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms