Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 AL138966.2-201ENST00000621997 464 ntBASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.88□□□□□ -0.19
MS4A6AQ9H2W1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 LINC00896-202ENST00000609602 2128 ntBASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 SEC1P-202ENST00000473944 940 ntBASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 MIR3180-4-201ENST00000582223 153 ntBASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 AC140113.3-201ENST00000605663 199 ntBASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 AC010240.3-201ENST00000607688 395 ntBASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 AC092865.7-201ENST00000641832 219 ntBASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MS4A6AQ9H2W1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 TERF1P1-201ENST00000311003 1181 ntBASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 AC005521.1-201ENST00000393351 872 ntBASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.86□□□□□ -0.19
MS4A6AQ9H2W1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms