Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX6-2Q9C056 AC068338.2-201ENST00000563278 1430 ntBASIC14.58□□□□□ -0.08
NKX6-2Q9C056 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 AC073210.2-201ENST00000430369 194 ntBASIC14.57□□□□□ -0.08
NKX6-2Q9C056 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX6-2Q9C056 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.56□□□□□ -0.08
NKX6-2Q9C056 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 YBX1P10-201ENST00000444752 975 ntBASIC14.56□□□□□ -0.08
NKX6-2Q9C056 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.56□□□□□ -0.08
NKX6-2Q9C056 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms