Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PRKY-204ENST00000533551 1019 ntBASIC13.61□□□□□ -0.23
AP1S3Q96PC3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 MIR4758-201ENST00000577688 71 ntBASIC13.61□□□□□ -0.23
AP1S3Q96PC3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 AL121832.2-201ENST00000610979 668 ntBASIC13.61□□□□□ -0.23
AP1S3Q96PC3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
AP1S3Q96PC3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 AC026271.2-201ENST00000428091 497 ntBASIC13.6□□□□□ -0.23
AP1S3Q96PC3 AC006970.2-201ENST00000450065 779 ntBASIC13.6□□□□□ -0.23
AP1S3Q96PC3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 SOX15-203ENST00000570788 1093 ntBASIC13.6□□□□□ -0.23
AP1S3Q96PC3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 AC022517.1-201ENST00000592429 346 ntBASIC13.6□□□□□ -0.23
AP1S3Q96PC3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 CICP6-201ENST00000457191 2729 ntBASIC13.6□□□□□ -0.23
AP1S3Q96PC3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP1S3Q96PC3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms