Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC148Q8NFR7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 AP000997.3-201ENST00000623333 2250 ntBASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 CHCHD2P8-201ENST00000429873 447 ntBASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC148Q8NFR7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 AC069148.1-201ENST00000608741 768 ntBASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 AL592071.1-201ENST00000611956 408 ntBASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 AC016734.2-201ENST00000624325 1377 ntBASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC148Q8NFR7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC148Q8NFR7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms