Protein–RNA interactions for Protein: Q6ZNB6

NFXL1, NF-X1-type zinc finger protein NFXL1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1Q6ZNB6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 NOC2LP1-202ENST00000452600 2235 ntBASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NFXL1Q6ZNB6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 IER3-202ENST00000376377 1350 ntBASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 AL358472.4-201ENST00000633140 710 ntBASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NFXL1Q6ZNB6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.15■□□□□ 0.98
NFXL1Q6ZNB6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NFXL1Q6ZNB6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 KRT18P65-201ENST00000439811 1286 ntBASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 AC116407.4-201ENST00000623319 1061 ntBASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NFXL1Q6ZNB6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms