Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CBX1P83916 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX1P83916 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.81■□□□□ 0.6
CBX1P83916 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX1P83916 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CBX1P83916 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CBX1P83916 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.81■□□□□ 0.6
CBX1P83916 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.81■□□□□ 0.6
CBX1P83916 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX1P83916 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.81■□□□□ 0.6
CBX1P83916 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.81■□□□□ 0.6
CBX1P83916 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.81■□□□□ 0.6
CBX1P83916 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.81■□□□□ 0.6
CBX1P83916 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.81■□□□□ 0.6
CBX1P83916 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CBX1P83916 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 AC005915.1-201ENST00000624912 2018 ntBASIC18.81■□□□□ 0.6
CBX1P83916 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CBX1P83916 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX1P83916 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
CBX1P83916 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CBX1P83916 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CBX1P83916 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CBX1P83916 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CBX1P83916 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.8■□□□□ 0.6
CBX1P83916 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.8■□□□□ 0.6
CBX1P83916 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CBX1P83916 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CBX1P83916 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CBX1P83916 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CBX1P83916 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.8■□□□□ 0.6
CBX1P83916 AC104581.4-201ENST00000623126 3052 ntBASIC18.8■□□□□ 0.6
CBX1P83916 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CBX1P83916 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX1P83916 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 AC124283.5-201ENST00000624661 1809 ntBASIC18.79■□□□□ 0.6
CBX1P83916 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX1P83916 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC18.79■□□□□ 0.6
CBX1P83916 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX1P83916 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CBX1P83916 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CBX1P83916 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX1P83916 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms