Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.7■□□□□ 0.42
CLDN2P57739 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN2P57739 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN2P57739 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 IL9RP2-201ENST00000423948 1312 ntBASIC17.7■□□□□ 0.42
CLDN2P57739 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN2P57739 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLDN2P57739 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLDN2P57739 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN2P57739 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 AC007967.3-201ENST00000434308 558 ntBASIC17.69■□□□□ 0.42
CLDN2P57739 HNRNPDP1-201ENST00000439535 754 ntBASIC17.69■□□□□ 0.42
CLDN2P57739 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.69■□□□□ 0.42
CLDN2P57739 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN2P57739 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 SART3-203ENST00000546611 1184 ntBASIC17.69■□□□□ 0.42
CLDN2P57739 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.69■□□□□ 0.42
CLDN2P57739 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN2P57739 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN2P57739 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CLDN2P57739 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN2P57739 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN2P57739 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN2P57739 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN2P57739 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 AC243591.1-201ENST00000452967 1364 ntBASIC17.68■□□□□ 0.42
CLDN2P57739 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.68■□□□□ 0.42
CLDN2P57739 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLDN2P57739 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN2P57739 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN2P57739 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN2P57739 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN2P57739 SLC25A1P1-201ENST00000528351 927 ntBASIC17.68■□□□□ 0.42
CLDN2P57739 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN2P57739 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.68■□□□□ 0.42
CLDN2P57739 AF228730.7-201ENST00000641842 219 ntBASIC17.68■□□□□ 0.42
CLDN2P57739 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLDN2P57739 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLDN2P57739 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN2P57739 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN2P57739 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLDN2P57739 KRT8P47-201ENST00000604727 1398 ntBASIC17.67■□□□□ 0.42
CLDN2P57739 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN2P57739 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN2P57739 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms