Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CDKN2DP55273 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDKN2DP55273 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKN2DP55273 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKN2DP55273 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKN2DP55273 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKN2DP55273 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.76■□□□□ 0.43
CDKN2DP55273 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CDKN2DP55273 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKN2DP55273 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.76■□□□□ 0.43
CDKN2DP55273 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 AC004263.2-201ENST00000617183 678 ntBASIC17.76■□□□□ 0.43
CDKN2DP55273 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKN2DP55273 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.76■□□□□ 0.43
CDKN2DP55273 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDKN2DP55273 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CDKN2DP55273 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDKN2DP55273 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDKN2DP55273 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 AC139713.2-201ENST00000641328 2723 ntBASIC17.75■□□□□ 0.43
CDKN2DP55273 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDKN2DP55273 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 TSPY5P-201ENST00000426936 936 ntBASIC17.75■□□□□ 0.43
CDKN2DP55273 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.75■□□□□ 0.43
CDKN2DP55273 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.75■□□□□ 0.43
CDKN2DP55273 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.75■□□□□ 0.43
CDKN2DP55273 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDKN2DP55273 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.75■□□□□ 0.43
CDKN2DP55273 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.75■□□□□ 0.43
CDKN2DP55273 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CDKN2DP55273 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDKN2DP55273 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CDKN2DP55273 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDKN2DP55273 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 RNF152P1-201ENST00000397754 604 ntBASIC17.74■□□□□ 0.43
CDKN2DP55273 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDKN2DP55273 KRT18P65-201ENST00000439811 1286 ntBASIC17.74■□□□□ 0.43
CDKN2DP55273 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
CDKN2DP55273 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.74■□□□□ 0.43
CDKN2DP55273 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 KRT8P47-201ENST00000604727 1398 ntBASIC17.74■□□□□ 0.43
CDKN2DP55273 AC009949.1-201ENST00000623048 1830 ntBASIC17.74■□□□□ 0.43
CDKN2DP55273 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDKN2DP55273 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDKN2DP55273 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKN2DP55273 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKN2DP55273 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.73■□□□□ 0.43
CDKN2DP55273 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDKN2DP55273 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.73■□□□□ 0.43
CDKN2DP55273 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDKN2DP55273 KRT18P48-201ENST00000434763 852 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms