Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC108073.2-201ENST00000464002 357 ntBASIC19.72■□□□□ 0.75
ACLYP53396 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.72■□□□□ 0.75
ACLYP53396 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 AC018845.2-201ENST00000568326 409 ntBASIC19.72■□□□□ 0.75
ACLYP53396 MIR4751-201ENST00000578027 74 ntBASIC19.72■□□□□ 0.75
ACLYP53396 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ACLYP53396 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ACLYP53396 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
ACLYP53396 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.72■□□□□ 0.75
ACLYP53396 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.72■□□□□ 0.75
ACLYP53396 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.71■□□□□ 0.75
ACLYP53396 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 ESPNP-201ENST00000270691 2015 ntBASIC19.71■□□□□ 0.75
ACLYP53396 ANO7L1-203ENST00000602586 1720 ntBASIC19.71■□□□□ 0.75
ACLYP53396 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.71■□□□□ 0.75
ACLYP53396 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.71■□□□□ 0.75
ACLYP53396 COX5BP2-201ENST00000392354 334 ntBASIC19.71■□□□□ 0.75
ACLYP53396 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.71■□□□□ 0.75
ACLYP53396 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.71■□□□□ 0.75
ACLYP53396 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ACLYP53396 MIR3197-201ENST00000582241 73 ntBASIC19.71■□□□□ 0.75
ACLYP53396 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 AL513190.1-201ENST00000621254 727 ntBASIC19.71■□□□□ 0.75
ACLYP53396 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ACLYP53396 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ACLYP53396 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.71■□□□□ 0.75
ACLYP53396 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACLYP53396 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.71■□□□□ 0.75
ACLYP53396 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
ACLYP53396 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
ACLYP53396 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ACLYP53396 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACLYP53396 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACLYP53396 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACLYP53396 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
ACLYP53396 HCG4B-203ENST00000450128 991 ntBASIC19.7■□□□□ 0.74
ACLYP53396 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.7■□□□□ 0.74
ACLYP53396 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.7■□□□□ 0.74
ACLYP53396 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.7■□□□□ 0.74
ACLYP53396 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.7■□□□□ 0.74
ACLYP53396 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.7■□□□□ 0.74
ACLYP53396 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.7■□□□□ 0.74
ACLYP53396 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.7■□□□□ 0.74
ACLYP53396 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ACLYP53396 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.7■□□□□ 0.74
ACLYP53396 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACLYP53396 SLC25A24-204ENST00000569674 2357 ntBASIC19.7■□□□□ 0.74
ACLYP53396 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACLYP53396 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ACLYP53396 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ACLYP53396 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.7■□□□□ 0.74
ACLYP53396 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ACLYP53396 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ACLYP53396 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACLYP53396 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACLYP53396 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.69■□□□□ 0.74
ACLYP53396 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
ACLYP53396 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACLYP53396 CNN2P11-201ENST00000429351 262 ntBASIC19.69■□□□□ 0.74
ACLYP53396 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.69■□□□□ 0.74
ACLYP53396 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.69■□□□□ 0.74
ACLYP53396 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.69■□□□□ 0.74
ACLYP53396 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ACLYP53396 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ACLYP53396 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.69■□□□□ 0.74
ACLYP53396 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.69■□□□□ 0.74
ACLYP53396 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ACLYP53396 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACLYP53396 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
ACLYP53396 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
ACLYP53396 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACLYP53396 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
ACLYP53396 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.69■□□□□ 0.74
ACLYP53396 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
ACLYP53396 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 AL353593.2-201ENST00000602529 1483 ntBASIC19.68■□□□□ 0.74
ACLYP53396 SIRPAP1-201ENST00000448467 1770 ntBASIC19.68■□□□□ 0.74
ACLYP53396 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.68■□□□□ 0.74
ACLYP53396 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.68■□□□□ 0.74
ACLYP53396 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACLYP53396 MKNK2P1-201ENST00000437526 628 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms