Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CDC34P49427 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC34P49427 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC34P49427 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.22□□□□□ -0.13
CDC34P49427 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.22□□□□□ -0.13
CDC34P49427 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDC34P49427 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDC34P49427 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDC34P49427 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CDC34P49427 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDC34P49427 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDC34P49427 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC34P49427 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDC34P49427 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDC34P49427 AC133963.1-201ENST00000504166 1679 ntBASIC14.21□□□□□ -0.13
CDC34P49427 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDC34P49427 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC34P49427 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.21□□□□□ -0.13
CDC34P49427 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.21□□□□□ -0.13
CDC34P49427 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.21□□□□□ -0.13
CDC34P49427 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC34P49427 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC34P49427 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDC34P49427 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC34P49427 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC34P49427 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDC34P49427 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDC34P49427 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDC34P49427 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDC34P49427 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
CDC34P49427 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDC34P49427 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.2□□□□□ -0.14
CDC34P49427 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CDC34P49427 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC34P49427 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.2□□□□□ -0.14
CDC34P49427 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.2□□□□□ -0.14
CDC34P49427 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC34P49427 AC073111.5-205ENST00000641717 521 ntBASIC14.2□□□□□ -0.14
CDC34P49427 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC34P49427 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms