Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL35P42766 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.53□□□□□ -0.08
RPL35P42766 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.53□□□□□ -0.08
RPL35P42766 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.53□□□□□ -0.08
RPL35P42766 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RPL35P42766 AL031432.3-201ENST00000607698 485 ntBASIC14.53□□□□□ -0.08
RPL35P42766 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.53□□□□□ -0.08
RPL35P42766 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL35P42766 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RPL35P42766 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RPL35P42766 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RPL35P42766 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL35P42766 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.53□□□□□ -0.08
RPL35P42766 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL35P42766 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL35P42766 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.53□□□□□ -0.08
RPL35P42766 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPL35P42766 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.53□□□□□ -0.08
RPL35P42766 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.52□□□□□ -0.08
RPL35P42766 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPL35P42766 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL35P42766 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RPL35P42766 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL35P42766 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL35P42766 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL35P42766 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RPL35P42766 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPL35P42766 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.52□□□□□ -0.09
RPL35P42766 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.52□□□□□ -0.09
RPL35P42766 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RPL35P42766 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RPL35P42766 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.52□□□□□ -0.09
RPL35P42766 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPL35P42766 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPL35P42766 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RPL35P42766 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RPL35P42766 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.52□□□□□ -0.09
RPL35P42766 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RPL35P42766 AL023806.1-201ENST00000603994 1649 ntBASIC14.52□□□□□ -0.09
RPL35P42766 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RPL35P42766 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
RPL35P42766 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL35P42766 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL35P42766 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.51□□□□□ -0.09
RPL35P42766 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.51□□□□□ -0.09
RPL35P42766 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.51□□□□□ -0.09
RPL35P42766 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL35P42766 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.51□□□□□ -0.09
RPL35P42766 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.51□□□□□ -0.09
RPL35P42766 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPL35P42766 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL35P42766 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL35P42766 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL35P42766 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL35P42766 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL35P42766 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL35P42766 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL35P42766 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL35P42766 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL35P42766 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.5□□□□□ -0.09
RPL35P42766 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL35P42766 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RPL35P42766 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.5□□□□□ -0.09
RPL35P42766 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms