Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC233702.3-201ENST00000578656 1387 ntBASIC18.42■□□□□ 0.54
MT-CO1P00395 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MT-CO1P00395 AC132938.6-201ENST00000623828 1655 ntBASIC18.41■□□□□ 0.54
MT-CO1P00395 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
MT-CO1P00395 AC135776.1-201ENST00000319817 2481 ntBASIC18.41■□□□□ 0.54
MT-CO1P00395 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-CO1P00395 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.41■□□□□ 0.54
MT-CO1P00395 AP005901.3-202ENST00000581653 237 ntBASIC18.41■□□□□ 0.54
MT-CO1P00395 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-CO1P00395 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-CO1P00395 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.41■□□□□ 0.54
MT-CO1P00395 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-CO1P00395 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-CO1P00395 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MT-CO1P00395 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-CO1P00395 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-CO1P00395 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MT-CO1P00395 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-CO1P00395 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-CO1P00395 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-CO1P00395 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-CO1P00395 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MT-CO1P00395 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
MT-CO1P00395 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 AC068472.1-201ENST00000474589 881 ntBASIC18.4■□□□□ 0.54
MT-CO1P00395 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-CO1P00395 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-CO1P00395 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.4■□□□□ 0.54
MT-CO1P00395 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-CO1P00395 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.39■□□□□ 0.54
MT-CO1P00395 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
MT-CO1P00395 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
MT-CO1P00395 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
MT-CO1P00395 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-CO1P00395 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-CO1P00395 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-CO1P00395 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.39■□□□□ 0.53
MT-CO1P00395 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-CO1P00395 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-CO1P00395 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.39■□□□□ 0.53
MT-CO1P00395 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MT-CO1P00395 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.39■□□□□ 0.53
MT-CO1P00395 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MT-CO1P00395 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MT-CO1P00395 AC093677.2-201ENST00000600169 1863 ntBASIC18.39■□□□□ 0.53
MT-CO1P00395 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.39■□□□□ 0.53
MT-CO1P00395 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-CO1P00395 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MT-CO1P00395 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-CO1P00395 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MT-CO1P00395 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-CO1P00395 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
MT-CO1P00395 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms