Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.64■□□□□ 0.41
CPNE6O95741 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE6O95741 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPNE6O95741 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE6O95741 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.64■□□□□ 0.41
CPNE6O95741 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE6O95741 AC008687.5-201ENST00000593746 558 ntBASIC17.64■□□□□ 0.41
CPNE6O95741 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE6O95741 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
CPNE6O95741 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPNE6O95741 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE6O95741 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CPNE6O95741 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CPNE6O95741 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE6O95741 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE6O95741 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE6O95741 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CPNE6O95741 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 IGHV3-47-201ENST00000425060 335 ntBASIC17.63■□□□□ 0.41
CPNE6O95741 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE6O95741 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE6O95741 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE6O95741 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE6O95741 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE6O95741 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE6O95741 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CPNE6O95741 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.63■□□□□ 0.41
CPNE6O95741 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE6O95741 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE6O95741 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE6O95741 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPNE6O95741 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CPNE6O95741 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE6O95741 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE6O95741 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CPNE6O95741 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE6O95741 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.62■□□□□ 0.41
CPNE6O95741 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE6O95741 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.62■□□□□ 0.41
CPNE6O95741 AC011840.4-201ENST00000578471 627 ntBASIC17.62■□□□□ 0.41
CPNE6O95741 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CPNE6O95741 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE6O95741 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE6O95741 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 AC008764.6-201ENST00000595909 2069 ntBASIC17.62■□□□□ 0.41
CPNE6O95741 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE6O95741 AC099398.1-201ENST00000567919 2776 ntBASIC17.62■□□□□ 0.41
CPNE6O95741 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE6O95741 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE6O95741 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.61■□□□□ 0.41
CPNE6O95741 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE6O95741 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE6O95741 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE6O95741 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.61■□□□□ 0.41
CPNE6O95741 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE6O95741 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms