Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPTLC1O15269 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
SPTLC1O15269 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SPTLC1O15269 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.2■□□□□ 0.66
SPTLC1O15269 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SPTLC1O15269 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.2■□□□□ 0.66
SPTLC1O15269 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.2■□□□□ 0.66
SPTLC1O15269 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SPTLC1O15269 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.2■□□□□ 0.66
SPTLC1O15269 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.2■□□□□ 0.66
SPTLC1O15269 POM121L3P-201ENST00000419331 1163 ntBASIC19.2■□□□□ 0.66
SPTLC1O15269 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.2■□□□□ 0.66
SPTLC1O15269 KRT16P4-201ENST00000453883 522 ntBASIC19.2■□□□□ 0.66
SPTLC1O15269 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.2■□□□□ 0.66
SPTLC1O15269 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.2■□□□□ 0.66
SPTLC1O15269 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.2■□□□□ 0.66
SPTLC1O15269 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.2■□□□□ 0.66
SPTLC1O15269 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.2■□□□□ 0.66
SPTLC1O15269 AC114341.1-201ENST00000618070 349 ntBASIC19.2■□□□□ 0.66
SPTLC1O15269 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SPTLC1O15269 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SPTLC1O15269 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SPTLC1O15269 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
SPTLC1O15269 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTLC1O15269 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTLC1O15269 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.19■□□□□ 0.66
SPTLC1O15269 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTLC1O15269 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.19■□□□□ 0.66
SPTLC1O15269 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTLC1O15269 AL160237.2-201ENST00000556165 472 ntBASIC19.19■□□□□ 0.66
SPTLC1O15269 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 AL031008.1-201ENST00000619963 541 ntBASIC19.19■□□□□ 0.66
SPTLC1O15269 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SPTLC1O15269 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTLC1O15269 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.19■□□□□ 0.66
SPTLC1O15269 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTLC1O15269 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTLC1O15269 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SPTLC1O15269 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTLC1O15269 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SPTLC1O15269 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTLC1O15269 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTLC1O15269 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SPTLC1O15269 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.18■□□□□ 0.66
SPTLC1O15269 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.18■□□□□ 0.66
SPTLC1O15269 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.18■□□□□ 0.66
SPTLC1O15269 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.18■□□□□ 0.66
SPTLC1O15269 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.18■□□□□ 0.66
SPTLC1O15269 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.18■□□□□ 0.66
SPTLC1O15269 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTLC1O15269 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.18■□□□□ 0.66
SPTLC1O15269 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTLC1O15269 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms