Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CHL1O00533 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC23.05■■□□□ 1.28
CHL1O00533 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.05■■□□□ 1.28
CHL1O00533 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.05■■□□□ 1.28
CHL1O00533 ABCD1P5-201ENST00000445663 754 ntBASIC23.05■■□□□ 1.28
CHL1O00533 FDX1P1-201ENST00000449115 551 ntBASIC23.05■■□□□ 1.28
CHL1O00533 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 AL160237.2-201ENST00000556165 472 ntBASIC23.05■■□□□ 1.28
CHL1O00533 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.05■■□□□ 1.28
CHL1O00533 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.05■■□□□ 1.28
CHL1O00533 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CHL1O00533 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC23.05■■□□□ 1.28
CHL1O00533 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHL1O00533 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHL1O00533 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.04■■□□□ 1.28
CHL1O00533 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHL1O00533 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
CHL1O00533 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC23.04■■□□□ 1.28
CHL1O00533 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.04■■□□□ 1.28
CHL1O00533 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.04■■□□□ 1.28
CHL1O00533 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHL1O00533 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHL1O00533 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.04■■□□□ 1.28
CHL1O00533 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CHL1O00533 AP000867.4-201ENST00000641616 219 ntBASIC23.04■■□□□ 1.28
CHL1O00533 AP005117.1-201ENST00000584346 1413 ntBASIC23.04■■□□□ 1.28
CHL1O00533 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHL1O00533 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHL1O00533 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.04■■□□□ 1.28
CHL1O00533 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CHL1O00533 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CHL1O00533 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CHL1O00533 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CHL1O00533 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CHL1O00533 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.03■■□□□ 1.28
CHL1O00533 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.03■■□□□ 1.28
CHL1O00533 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.03■■□□□ 1.28
CHL1O00533 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.03■■□□□ 1.28
CHL1O00533 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.03■■□□□ 1.28
CHL1O00533 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.03■■□□□ 1.28
CHL1O00533 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CHL1O00533 AL355877.3-201ENST00000622820 899 ntBASIC23.03■■□□□ 1.28
CHL1O00533 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CHL1O00533 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHL1O00533 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.03■■□□□ 1.28
CHL1O00533 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CHL1O00533 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHL1O00533 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHL1O00533 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.02■■□□□ 1.28
CHL1O00533 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHL1O00533 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.02■■□□□ 1.28
CHL1O00533 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHL1O00533 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.02■■□□□ 1.28
CHL1O00533 AC009078.2-202ENST00000463353 338 ntBASIC23.02■■□□□ 1.28
CHL1O00533 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.02■■□□□ 1.28
CHL1O00533 AP002469.2-201ENST00000531724 424 ntBASIC23.02■■□□□ 1.28
CHL1O00533 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.02■■□□□ 1.28
CHL1O00533 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.02■■□□□ 1.28
CHL1O00533 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.02■■□□□ 1.28
CHL1O00533 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.02■■□□□ 1.28
CHL1O00533 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.02■■□□□ 1.28
CHL1O00533 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHL1O00533 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CHL1O00533 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC23.02■■□□□ 1.28
CHL1O00533 NEFHP1-201ENST00000412845 2629 ntBASIC23.02■■□□□ 1.28
CHL1O00533 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
CHL1O00533 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.02■■□□□ 1.28
CHL1O00533 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
CHL1O00533 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHL1O00533 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHL1O00533 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.01■■□□□ 1.27
CHL1O00533 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
CHL1O00533 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.01■■□□□ 1.27
CHL1O00533 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHL1O00533 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
CHL1O00533 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHL1O00533 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms