Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00473A8K010 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
LINC00473A8K010 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LINC00473A8K010 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LINC00473A8K010 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 LINC00602-201ENST00000629776 2065 ntBASIC14.64□□□□□ -0.07
LINC00473A8K010 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00473A8K010 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
LINC00473A8K010 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00473A8K010 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LINC00473A8K010 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 ECEL1P3-201ENST00000427961 737 ntBASIC14.64□□□□□ -0.07
LINC00473A8K010 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC00473A8K010 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.64□□□□□ -0.07
LINC00473A8K010 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.64□□□□□ -0.07
LINC00473A8K010 AC008687.5-201ENST00000593746 558 ntBASIC14.64□□□□□ -0.07
LINC00473A8K010 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.64□□□□□ -0.07
LINC00473A8K010 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LINC00473A8K010 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 SIRPAP1-201ENST00000448467 1770 ntBASIC14.64□□□□□ -0.07
LINC00473A8K010 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 AC080080.1-201ENST00000625121 2420 ntBASIC14.64□□□□□ -0.07
LINC00473A8K010 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.64□□□□□ -0.07
LINC00473A8K010 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00473A8K010 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00473A8K010 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00473A8K010 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00473A8K010 LINC01568-207ENST00000641790 1380 ntBASIC14.63□□□□□ -0.07
LINC00473A8K010 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
LINC00473A8K010 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00473A8K010 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00473A8K010 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00473A8K010 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LINC00473A8K010 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.63□□□□□ -0.07
LINC00473A8K010 AC022898.2-201ENST00000616822 1312 ntBASIC14.63□□□□□ -0.07
LINC00473A8K010 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00473A8K010 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LINC00473A8K010 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00473A8K010 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
LINC00473A8K010 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00473A8K010 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00473A8K010 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00473A8K010 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00473A8K010 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC00473A8K010 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00473A8K010 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00473A8K010 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00473A8K010 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00473A8K010 AP000523.1-201ENST00000398242 1049 ntBASIC14.62□□□□□ -0.07
LINC00473A8K010 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00473A8K010 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms