Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
LINC01546A6NGU7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.68□□□□□ -0.38
LINC01546A6NGU7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 SOX15-203ENST00000570788 1093 ntBASIC12.68□□□□□ -0.38
LINC01546A6NGU7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 HOXB1-202ENST00000577092 1414 ntBASIC12.68□□□□□ -0.38
LINC01546A6NGU7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC01546A6NGU7 HCG11-201ENST00000411553 5696 ntBASIC12.68□□□□□ -0.38
LINC01546A6NGU7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 DDX43P3-201ENST00000441064 443 ntBASIC12.67□□□□□ -0.38
LINC01546A6NGU7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 RARRES2P10-201ENST00000564312 460 ntBASIC12.67□□□□□ -0.38
LINC01546A6NGU7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 MYC-209ENST00000641252 345 ntBASIC12.67□□□□□ -0.38
LINC01546A6NGU7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 AC099343.3-201ENST00000605834 2503 ntBASIC12.67□□□□□ -0.38
LINC01546A6NGU7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 LINC02012-201ENST00000608206 1725 ntBASIC12.67□□□□□ -0.38
LINC01546A6NGU7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01546A6NGU7 AC046185.3-201ENST00000623228 1824 ntBASIC12.67□□□□□ -0.38
LINC01546A6NGU7 AC078925.2-201ENST00000624013 1973 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms