Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV20-1A0A075B6N2 FAM45BP-202ENST00000592932 1624 ntBASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 AC092028.1-203ENST00000608262 953 ntBASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 AL358852.1-201ENST00000623174 1268 ntBASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 KRT18P55-202ENST00000578578 1546 ntBASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12□□□□□ -0.49
TRBV20-1A0A075B6N2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 DBET-201ENST00000630918 3363 ntBASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 AC133963.1-201ENST00000504166 1679 ntBASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRBV20-1A0A075B6N2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRBV20-1A0A075B6N2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms