Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AP003733.1-201ENST00000491725 852 ntBASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 AC024563.2-201ENST00000603282 481 ntBASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 AL024508.2-201ENST00000607749 1894 ntBASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHB11Q9Y5F2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 TSPY19P-201ENST00000418461 509 ntBASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 TSPY18P-201ENST00000441642 509 ntBASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 AC012615.1-201ENST00000565797 1299 ntBASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 AC090616.6-201ENST00000582640 721 ntBASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 AC005332.8-201ENST00000622750 2735 ntBASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHB11Q9Y5F2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 ESPNP-201ENST00000270691 2015 ntBASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 AC104819.1-201ENST00000504587 486 ntBASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 KRT89P-201ENST00000620027 1478 ntBASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHB11Q9Y5F2 AC068880.1-201ENST00000507289 2297 ntBASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 LINC01126-201ENST00000623515 1646 ntBASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHB11Q9Y5F2 EMBP1-201ENST00000458200 901 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms