Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 AC022898.2-201ENST00000616822 1312 ntBASIC18.74■□□□□ 0.59
YIPF1Q9Y548 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YIPF1Q9Y548 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 RPS2P28-201ENST00000314255 741 ntBASIC18.73■□□□□ 0.59
YIPF1Q9Y548 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 NKAPP1-205ENST00000585790 367 ntBASIC18.73■□□□□ 0.59
YIPF1Q9Y548 AC116407.3-201ENST00000623905 1129 ntBASIC18.73■□□□□ 0.59
YIPF1Q9Y548 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.73■□□□□ 0.59
YIPF1Q9Y548 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 AL096828.2-201ENST00000567259 1965 ntBASIC18.72■□□□□ 0.59
YIPF1Q9Y548 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 AC122714.2-201ENST00000502787 707 ntBASIC18.72■□□□□ 0.59
YIPF1Q9Y548 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 OR7E14P-202ENST00000530490 1290 ntBASIC18.72■□□□□ 0.59
YIPF1Q9Y548 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
YIPF1Q9Y548 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 AC106730.1-201ENST00000566722 1090 ntBASIC18.71■□□□□ 0.59
YIPF1Q9Y548 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YIPF1Q9Y548 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
YIPF1Q9Y548 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.71■□□□□ 0.58
YIPF1Q9Y548 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.71■□□□□ 0.58
YIPF1Q9Y548 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 RPL13AP23-201ENST00000480739 586 ntBASIC18.7■□□□□ 0.58
YIPF1Q9Y548 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 KRT18P58-201ENST00000527480 1120 ntBASIC18.7■□□□□ 0.58
YIPF1Q9Y548 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms