Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 PCED1CP-201ENST00000419887 785 ntBASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 KRT8P26-201ENST00000534154 1276 ntBASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20■□□□□ 0.79
BLOC1S4Q9NUP1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.99■□□□□ 0.79
BLOC1S4Q9NUP1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AC016734.2-201ENST00000624325 1377 ntBASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 MIR1224-201ENST00000408193 85 ntBASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 LINC00896-202ENST00000609602 2128 ntBASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AL353801.3-201ENST00000609898 542 ntBASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BLOC1S4Q9NUP1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 AIRN-201ENST00000601203 4374 ntBASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 AL592071.1-201ENST00000611956 408 ntBASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
BLOC1S4Q9NUP1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms