Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
TTC9Q92623 AP001160.2-201ENST00000596071 487 ntBASIC17.14■□□□□ 0.33
TTC9Q92623 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9Q92623 AL591684.3-201ENST00000605187 298 ntBASIC17.14■□□□□ 0.33
TTC9Q92623 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.14■□□□□ 0.33
TTC9Q92623 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.14■□□□□ 0.33
TTC9Q92623 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9Q92623 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9Q92623 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TTC9Q92623 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TTC9Q92623 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 HOXB1-202ENST00000577092 1414 ntBASIC17.13■□□□□ 0.33
TTC9Q92623 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 AL357033.4-201ENST00000617703 1807 ntBASIC17.13■□□□□ 0.33
TTC9Q92623 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC9Q92623 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 AC008608.2-201ENST00000606089 416 ntBASIC17.13■□□□□ 0.33
TTC9Q92623 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 FAM215A-202ENST00000632077 792 ntBASIC17.13■□□□□ 0.33
TTC9Q92623 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC9Q92623 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TTC9Q92623 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC9Q92623 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TTC9Q92623 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TTC9Q92623 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC9Q92623 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC9Q92623 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.12■□□□□ 0.33
TTC9Q92623 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.12■□□□□ 0.33
TTC9Q92623 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC9Q92623 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TTC9Q92623 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 KRT18P41-201ENST00000518924 1277 ntBASIC17.12■□□□□ 0.33
TTC9Q92623 MIR5100-201ENST00000579544 119 ntBASIC17.12■□□□□ 0.33
TTC9Q92623 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.12■□□□□ 0.33
TTC9Q92623 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.12■□□□□ 0.33
TTC9Q92623 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TTC9Q92623 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9Q92623 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC9Q92623 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.11■□□□□ 0.33
TTC9Q92623 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TTC9Q92623 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TTC9Q92623 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9Q92623 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9Q92623 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9Q92623 Z98044.1-201ENST00000632503 1764 ntBASIC17.11■□□□□ 0.33
TTC9Q92623 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.11■□□□□ 0.33
TTC9Q92623 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9Q92623 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC9Q92623 BNIP3P18-201ENST00000593976 575 ntBASIC17.11■□□□□ 0.33
TTC9Q92623 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC9Q92623 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TTC9Q92623 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9Q92623 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9Q92623 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms