Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 KRT18P65-201ENST00000439811 1286 ntBASIC19.43■□□□□ 0.7
HERC6Q8IVU3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 AL596442.2-201ENST00000610240 980 ntBASIC19.42■□□□□ 0.7
HERC6Q8IVU3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HERC6Q8IVU3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 AC064836.3-201ENST00000607928 673 ntBASIC19.41■□□□□ 0.7
HERC6Q8IVU3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC6Q8IVU3 MYLKP1-201ENST00000509077 1580 ntBASIC19.4■□□□□ 0.7
HERC6Q8IVU3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 METTL21AP1-201ENST00000438852 635 ntBASIC19.4■□□□□ 0.7
HERC6Q8IVU3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 MIR1199-201ENST00000621445 119 ntBASIC19.4■□□□□ 0.7
HERC6Q8IVU3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC6Q8IVU3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HERC6Q8IVU3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HERC6Q8IVU3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
HERC6Q8IVU3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 AC005332.7-201ENST00000614046 2005 ntBASIC19.39■□□□□ 0.69
HERC6Q8IVU3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC6Q8IVU3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms