Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 DUTP2-201ENST00000519164 463 ntBASIC19.24■□□□□ 0.67
RAD23BP54727 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.24■□□□□ 0.67
RAD23BP54727 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.24■□□□□ 0.67
RAD23BP54727 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 AP000550.4-202ENST00000639755 178 ntBASIC19.24■□□□□ 0.67
RAD23BP54727 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD23BP54727 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD23BP54727 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD23BP54727 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RAD23BP54727 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.24■□□□□ 0.67
RAD23BP54727 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD23BP54727 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAD23BP54727 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.23■□□□□ 0.67
RAD23BP54727 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RAD23BP54727 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.23■□□□□ 0.67
RAD23BP54727 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.23■□□□□ 0.67
RAD23BP54727 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAD23BP54727 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 FLJ13224-201ENST00000313737 1514 ntBASIC19.23■□□□□ 0.67
RAD23BP54727 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RAD23BP54727 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAD23BP54727 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD23BP54727 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.22■□□□□ 0.67
RAD23BP54727 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
RAD23BP54727 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RAD23BP54727 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.22■□□□□ 0.67
RAD23BP54727 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.22■□□□□ 0.67
RAD23BP54727 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 KRT18P65-201ENST00000439811 1286 ntBASIC19.22■□□□□ 0.67
RAD23BP54727 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 KRT8P26-201ENST00000534154 1276 ntBASIC19.22■□□□□ 0.67
RAD23BP54727 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.22■□□□□ 0.67
RAD23BP54727 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 HCG11-201ENST00000411553 5696 ntBASIC19.22■□□□□ 0.67
RAD23BP54727 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
RAD23BP54727 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD23BP54727 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RAD23BP54727 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 NOC2LP1-202ENST00000452600 2235 ntBASIC19.21■□□□□ 0.67
RAD23BP54727 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 AC016734.2-201ENST00000624325 1377 ntBASIC19.21■□□□□ 0.67
RAD23BP54727 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RAD23BP54727 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
RAD23BP54727 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
RAD23BP54727 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms