Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.35■□□□□ 0.85
CCT6AP40227 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 AL645929.1-201ENST00000420084 975 ntBASIC20.35■□□□□ 0.85
CCT6AP40227 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.35■□□□□ 0.85
CCT6AP40227 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 AC113404.2-201ENST00000507884 177 ntBASIC20.35■□□□□ 0.85
CCT6AP40227 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.35■□□□□ 0.85
CCT6AP40227 AL136038.3-201ENST00000561909 1096 ntBASIC20.35■□□□□ 0.85
CCT6AP40227 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.35■□□□□ 0.85
CCT6AP40227 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.35■□□□□ 0.85
CCT6AP40227 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.35■□□□□ 0.85
CCT6AP40227 AL445228.2-201ENST00000605589 952 ntBASIC20.35■□□□□ 0.85
CCT6AP40227 AL121956.5-201ENST00000625261 221 ntBASIC20.35■□□□□ 0.85
CCT6AP40227 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCT6AP40227 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCT6AP40227 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.35■□□□□ 0.85
CCT6AP40227 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCT6AP40227 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCT6AP40227 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.34■□□□□ 0.85
CCT6AP40227 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 IGHGP-201ENST00000390555 1178 ntBASIC20.34■□□□□ 0.85
CCT6AP40227 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.34■□□□□ 0.85
CCT6AP40227 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.34■□□□□ 0.85
CCT6AP40227 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 RNF126P1-202ENST00000569893 925 ntBASIC20.34■□□□□ 0.85
CCT6AP40227 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 AC004263.2-201ENST00000617183 678 ntBASIC20.34■□□□□ 0.85
CCT6AP40227 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCT6AP40227 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
CCT6AP40227 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.34■□□□□ 0.85
CCT6AP40227 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.33■□□□□ 0.85
CCT6AP40227 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.33■□□□□ 0.85
CCT6AP40227 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.33■□□□□ 0.85
CCT6AP40227 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCT6AP40227 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 ARMC10P1-201ENST00000313754 855 ntBASIC20.33■□□□□ 0.85
CCT6AP40227 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.33■□□□□ 0.85
CCT6AP40227 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.33■□□□□ 0.85
CCT6AP40227 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCT6AP40227 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.33■□□□□ 0.85
CCT6AP40227 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.33■□□□□ 0.85
CCT6AP40227 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.33■□□□□ 0.85
CCT6AP40227 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.33■□□□□ 0.85
CCT6AP40227 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.33■□□□□ 0.85
CCT6AP40227 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 LINC00167-201ENST00000530583 1419 ntBASIC20.33■□□□□ 0.84
CCT6AP40227 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CCT6AP40227 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
CCT6AP40227 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.33■□□□□ 0.84
CCT6AP40227 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CCT6AP40227 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCT6AP40227 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
CCT6AP40227 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCT6AP40227 AC132938.6-201ENST00000623828 1655 ntBASIC20.32■□□□□ 0.84
CCT6AP40227 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms