Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ZBED1O96006 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.03■□□□□ 0.64
ZBED1O96006 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.03■□□□□ 0.64
ZBED1O96006 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.03■□□□□ 0.64
ZBED1O96006 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
ZBED1O96006 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.03■□□□□ 0.64
ZBED1O96006 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.03■□□□□ 0.64
ZBED1O96006 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.03■□□□□ 0.64
ZBED1O96006 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.03■□□□□ 0.64
ZBED1O96006 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.03■□□□□ 0.64
ZBED1O96006 AC090616.6-201ENST00000582640 721 ntBASIC19.03■□□□□ 0.64
ZBED1O96006 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.03■□□□□ 0.64
ZBED1O96006 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ZBED1O96006 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ZBED1O96006 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZBED1O96006 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 LINC00167-201ENST00000530583 1419 ntBASIC19.02■□□□□ 0.64
ZBED1O96006 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
ZBED1O96006 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.02■□□□□ 0.64
ZBED1O96006 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.02■□□□□ 0.64
ZBED1O96006 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.02■□□□□ 0.64
ZBED1O96006 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.02■□□□□ 0.64
ZBED1O96006 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.02■□□□□ 0.64
ZBED1O96006 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZBED1O96006 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.02■□□□□ 0.63
ZBED1O96006 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZBED1O96006 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.02■□□□□ 0.63
ZBED1O96006 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZBED1O96006 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZBED1O96006 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZBED1O96006 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
ZBED1O96006 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.01■□□□□ 0.63
ZBED1O96006 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZBED1O96006 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 TSPY12P-201ENST00000421279 868 ntBASIC19.01■□□□□ 0.63
ZBED1O96006 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.01■□□□□ 0.63
ZBED1O96006 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.01■□□□□ 0.63
ZBED1O96006 ATP5G2P1-201ENST00000433580 426 ntBASIC19.01■□□□□ 0.63
ZBED1O96006 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.01■□□□□ 0.63
ZBED1O96006 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.01■□□□□ 0.63
ZBED1O96006 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.01■□□□□ 0.63
ZBED1O96006 GUSBP12-201ENST00000513727 720 ntBASIC19.01■□□□□ 0.63
ZBED1O96006 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.01■□□□□ 0.63
ZBED1O96006 NPAP1P7-201ENST00000613027 823 ntBASIC19.01■□□□□ 0.63
ZBED1O96006 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
ZBED1O96006 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.01■□□□□ 0.63
ZBED1O96006 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZBED1O96006 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZBED1O96006 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.01■□□□□ 0.63
ZBED1O96006 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZBED1O96006 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.01■□□□□ 0.63
ZBED1O96006 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZBED1O96006 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZBED1O96006 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ZBED1O96006 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19■□□□□ 0.63
ZBED1O96006 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms