Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST1O76090 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST1O76090 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST1O76090 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
BEST1O76090 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BEST1O76090 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BEST1O76090 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BEST1O76090 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.87■□□□□ 0.61
BEST1O76090 KRT18P31-201ENST00000506277 1292 ntBASIC18.87■□□□□ 0.61
BEST1O76090 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.87■□□□□ 0.61
BEST1O76090 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.87■□□□□ 0.61
BEST1O76090 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 AC138028.4-201ENST00000564984 1845 ntBASIC18.87■□□□□ 0.61
BEST1O76090 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.87■□□□□ 0.61
BEST1O76090 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BEST1O76090 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BEST1O76090 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BEST1O76090 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BEST1O76090 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST1O76090 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BEST1O76090 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 NUS1P2-201ENST00000417358 873 ntBASIC18.86■□□□□ 0.61
BEST1O76090 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST1O76090 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST1O76090 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.86■□□□□ 0.61
BEST1O76090 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.86■□□□□ 0.61
BEST1O76090 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST1O76090 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.86■□□□□ 0.61
BEST1O76090 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.86■□□□□ 0.61
BEST1O76090 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST1O76090 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST1O76090 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST1O76090 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.86■□□□□ 0.61
BEST1O76090 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BEST1O76090 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
BEST1O76090 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BEST1O76090 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST1O76090 TP73-AS1-210ENST00000637775 1455 ntBASIC18.85■□□□□ 0.61
BEST1O76090 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST1O76090 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 AC022898.2-201ENST00000616822 1312 ntBASIC18.85■□□□□ 0.61
BEST1O76090 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST1O76090 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.85■□□□□ 0.61
BEST1O76090 RCN1P2-201ENST00000398357 915 ntBASIC18.85■□□□□ 0.61
BEST1O76090 AC096582.2-201ENST00000510860 516 ntBASIC18.85■□□□□ 0.61
BEST1O76090 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
BEST1O76090 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.85■□□□□ 0.61
BEST1O76090 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.85■□□□□ 0.61
BEST1O76090 AL121894.2-201ENST00000602977 491 ntBASIC18.85■□□□□ 0.61
BEST1O76090 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BEST1O76090 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST1O76090 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BEST1O76090 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST1O76090 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.85■□□□□ 0.61
BEST1O76090 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
BEST1O76090 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms