Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPNE3O75131 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 KRT18P31-201ENST00000506277 1292 ntBASIC17.29■□□□□ 0.36
CPNE3O75131 AC113404.2-201ENST00000507884 177 ntBASIC17.29■□□□□ 0.36
CPNE3O75131 UNC93B7-201ENST00000509439 705 ntBASIC17.29■□□□□ 0.36
CPNE3O75131 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CPNE3O75131 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPNE3O75131 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE3O75131 AC099336.1-202ENST00000602961 463 ntBASIC17.29■□□□□ 0.36
CPNE3O75131 AC138894.3-201ENST00000603787 634 ntBASIC17.29■□□□□ 0.36
CPNE3O75131 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.29■□□□□ 0.36
CPNE3O75131 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE3O75131 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE3O75131 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE3O75131 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE3O75131 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE3O75131 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE3O75131 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CPNE3O75131 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE3O75131 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE3O75131 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPNE3O75131 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CPNE3O75131 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE3O75131 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.28■□□□□ 0.36
CPNE3O75131 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE3O75131 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.28■□□□□ 0.36
CPNE3O75131 AC011840.4-201ENST00000578471 627 ntBASIC17.28■□□□□ 0.36
CPNE3O75131 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE3O75131 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.28■□□□□ 0.36
CPNE3O75131 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE3O75131 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPNE3O75131 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE3O75131 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CPNE3O75131 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPNE3O75131 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CPNE3O75131 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.27■□□□□ 0.36
CPNE3O75131 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
CPNE3O75131 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.27■□□□□ 0.36
CPNE3O75131 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPNE3O75131 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE3O75131 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CPNE3O75131 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CPNE3O75131 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.27■□□□□ 0.35
CPNE3O75131 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPNE3O75131 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms