Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
O00370 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.2■□□□□ 0.66
O00370 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
O00370 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.2■□□□□ 0.66
O00370 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.2■□□□□ 0.66
O00370 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.2■□□□□ 0.66
O00370 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.2■□□□□ 0.66
O00370 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.2■□□□□ 0.66
O00370 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.2■□□□□ 0.66
O00370 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.2■□□□□ 0.66
O00370 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.2■□□□□ 0.66
O00370 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
O00370 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.2■□□□□ 0.66
O00370 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
O00370 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.2■□□□□ 0.66
O00370 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.2■□□□□ 0.66
O00370 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
O00370 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
O00370 AL353692.3-201ENST00000407031 1396 ntBASIC19.19■□□□□ 0.66
O00370 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
O00370 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
O00370 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.19■□□□□ 0.66
O00370 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
O00370 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.19■□□□□ 0.66
O00370 AC011498.5-201ENST00000592027 486 ntBASIC19.19■□□□□ 0.66
O00370 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
O00370 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.19■□□□□ 0.66
O00370 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.19■□□□□ 0.66
O00370 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.19■□□□□ 0.66
O00370 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.19■□□□□ 0.66
O00370 FZD10-202ENST00000539839 3282 ntBASIC19.19■□□□□ 0.66
O00370 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
O00370 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
O00370 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.18■□□□□ 0.66
O00370 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.18■□□□□ 0.66
O00370 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.18■□□□□ 0.66
O00370 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.18■□□□□ 0.66
O00370 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
O00370 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.18■□□□□ 0.66
O00370 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.18■□□□□ 0.66
O00370 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 PCED1CP-201ENST00000419887 785 ntBASIC19.18■□□□□ 0.66
O00370 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.18■□□□□ 0.66
O00370 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.18■□□□□ 0.66
O00370 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.18■□□□□ 0.66
O00370 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
O00370 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.18■□□□□ 0.66
O00370 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.18■□□□□ 0.66
O00370 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
O00370 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.18■□□□□ 0.66
O00370 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
O00370 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
O00370 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
O00370 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
O00370 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.17■□□□□ 0.66
O00370 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 AC138028.4-201ENST00000564984 1845 ntBASIC19.17■□□□□ 0.66
O00370 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
O00370 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms