Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AL645929.1-201ENST00000420084 975 ntBASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 HCG4P8-203ENST00000443049 980 ntBASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PKD1P1-201ENST00000458669 6805 ntBASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TCRBV4S1A1TA0A5B7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SEC1P-202ENST00000473944 940 ntBASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV4S1A1TA0A5B7 KRT8P7-201ENST00000533003 1432 ntBASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 KRT18P41-201ENST00000518924 1277 ntBASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 AL157888.1-201ENST00000631930 593 ntBASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV4S1A1TA0A5B7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV4S1A1TA0A5B7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms