Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IGHGP-201ENST00000390555 1178 ntBASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 TSPY19P-201ENST00000418461 509 ntBASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 TSPY18P-201ENST00000441642 509 ntBASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 FAAHP1-202ENST00000446499 1238 ntBASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 AC074051.2-201ENST00000565115 352 ntBASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPA1Q9UND3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.64■□□□□ 0.26
NPIPA1Q9UND3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
NPIPA1Q9UND3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
NPIPA1Q9UND3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 LINC00167-201ENST00000530583 1419 ntBASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 GUSBP12-201ENST00000513727 720 ntBASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPA1Q9UND3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 AC138894.3-201ENST00000603787 634 ntBASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 AC124864.1-201ENST00000623408 392 ntBASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPA1Q9UND3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 KRT8P50-201ENST00000562022 1438 ntBASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPA1Q9UND3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms