Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHB16Q9NRJ7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB16Q9NRJ7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB16Q9NRJ7 GNAS-203ENST00000306120 1878 ntBASIC15.71■□□□□ 0.11
PCDHB16Q9NRJ7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHB16Q9NRJ7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHB16Q9NRJ7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
PCDHB16Q9NRJ7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.71■□□□□ 0.1
PCDHB16Q9NRJ7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHB16Q9NRJ7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 KRT8P7-201ENST00000533003 1432 ntBASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHB16Q9NRJ7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 FAM197Y1-201ENST00000421178 764 ntBASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 MFAP1P1-201ENST00000442257 1255 ntBASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 AC116562.2-201ENST00000507042 360 ntBASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 AC008764.6-201ENST00000595909 2069 ntBASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHB16Q9NRJ7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 AC012618.2-201ENST00000428058 849 ntBASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 AC097488.1-201ENST00000507834 756 ntBASIC15.68■□□□□ 0.1
PCDHB16Q9NRJ7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms