Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 AC023511.2-201ENST00000618803 211 ntBASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 FOSL1P1-201ENST00000511041 816 ntBASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
POLR1BQ9H9Y6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 TOB2P1-201ENST00000469761 992 ntBASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 KRT18P31-201ENST00000506277 1292 ntBASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 RNF126P1-202ENST00000569893 925 ntBASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.84■□□□□ 0.45
POLR1BQ9H9Y6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 KRT8P3-201ENST00000519669 1449 ntBASIC17.83■□□□□ 0.45
POLR1BQ9H9Y6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms