Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 AC016734.2-201ENST00000624325 1377 ntBASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCM2Q9BSQ5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 AC022898.2-201ENST00000616822 1312 ntBASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 FLJ13224-201ENST00000313737 1514 ntBASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 AC138028.4-201ENST00000564984 1845 ntBASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 CHCHD2P8-201ENST00000429873 447 ntBASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 TSSC2-201ENST00000450217 709 ntBASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 IGHV3-41-201ENST00000613121 348 ntBASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2Q9BSQ5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.72■□□□□ 0.43
CCM2Q9BSQ5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms