Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS1Q99742 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 IER3-202ENST00000376377 1350 ntBASIC16.42■□□□□ 0.22
NPAS1Q99742 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS1Q99742 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.42■□□□□ 0.22
NPAS1Q99742 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.42■□□□□ 0.22
NPAS1Q99742 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.42■□□□□ 0.22
NPAS1Q99742 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.42■□□□□ 0.22
NPAS1Q99742 AC011498.5-201ENST00000592027 486 ntBASIC16.42■□□□□ 0.22
NPAS1Q99742 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.42■□□□□ 0.22
NPAS1Q99742 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
NPAS1Q99742 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NPAS1Q99742 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NPAS1Q99742 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
NPAS1Q99742 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NPAS1Q99742 KRT89P-201ENST00000620027 1478 ntBASIC16.42■□□□□ 0.22
NPAS1Q99742 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS1Q99742 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 AC139713.2-201ENST00000641328 2723 ntBASIC16.41■□□□□ 0.22
NPAS1Q99742 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS1Q99742 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
NPAS1Q99742 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS1Q99742 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.41■□□□□ 0.22
NPAS1Q99742 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS1Q99742 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS1Q99742 GPR32P1-201ENST00000601788 811 ntBASIC16.41■□□□□ 0.22
NPAS1Q99742 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS1Q99742 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.41■□□□□ 0.22
NPAS1Q99742 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
NPAS1Q99742 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS1Q99742 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS1Q99742 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.41■□□□□ 0.22
NPAS1Q99742 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NPAS1Q99742 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS1Q99742 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
NPAS1Q99742 AL353692.3-201ENST00000407031 1396 ntBASIC16.4■□□□□ 0.22
NPAS1Q99742 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS1Q99742 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS1Q99742 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NPAS1Q99742 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS1Q99742 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS1Q99742 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.4■□□□□ 0.22
NPAS1Q99742 TSPY22P-201ENST00000427496 604 ntBASIC16.4■□□□□ 0.22
NPAS1Q99742 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS1Q99742 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPAS1Q99742 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.4■□□□□ 0.22
NPAS1Q99742 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.4■□□□□ 0.22
NPAS1Q99742 AP000550.4-202ENST00000639755 178 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms