Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 LINC00602-201ENST00000629776 2065 ntBASIC16.89■□□□□ 0.29
NUP43Q8NFH3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP43Q8NFH3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 LINC00167-201ENST00000530583 1419 ntBASIC16.88■□□□□ 0.29
NUP43Q8NFH3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 RNF152P1-201ENST00000397754 604 ntBASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AK4P3-201ENST00000418260 669 ntBASIC16.88■□□□□ 0.29
NUP43Q8NFH3 TSPY5P-201ENST00000426936 936 ntBASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AC113404.2-201ENST00000507884 177 ntBASIC16.88■□□□□ 0.29
NUP43Q8NFH3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AC022898.2-201ENST00000616822 1312 ntBASIC16.88■□□□□ 0.29
NUP43Q8NFH3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
NUP43Q8NFH3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 KRT89P-201ENST00000620027 1478 ntBASIC16.87■□□□□ 0.29
NUP43Q8NFH3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NUP43Q8NFH3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms