Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 AC008894.3-201ENST00000624324 3103 ntBASIC15.75■□□□□ 0.11
C11orf88Q6PI97 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
C11orf88Q6PI97 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AD000864.1-201ENST00000624076 2295 ntBASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
C11orf88Q6PI97 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 AC135776.1-201ENST00000319817 2481 ntBASIC15.73■□□□□ 0.11
C11orf88Q6PI97 NBPF21P-201ENST00000425093 1451 ntBASIC15.73■□□□□ 0.11
C11orf88Q6PI97 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms