Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 KRT8P32-201ENST00000512863 1461 ntBASIC13.65□□□□□ -0.22
MRPL54Q6P161 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 AL355312.1-201ENST00000407115 2176 ntBASIC13.64□□□□□ -0.23
MRPL54Q6P161 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 CYP2T1P-201ENST00000432607 1285 ntBASIC13.64□□□□□ -0.23
MRPL54Q6P161 RPS2P52-201ENST00000469610 820 ntBASIC13.64□□□□□ -0.23
MRPL54Q6P161 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 FLJ38576-201ENST00000623820 2459 ntBASIC13.64□□□□□ -0.23
MRPL54Q6P161 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 AC010980.2-201ENST00000587099 1412 ntBASIC13.64□□□□□ -0.23
MRPL54Q6P161 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.64□□□□□ -0.23
MRPL54Q6P161 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL54Q6P161 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 PHGDH-209ENST00000641074 1780 ntBASIC13.63□□□□□ -0.23
MRPL54Q6P161 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 GMCL1P1-201ENST00000463439 1581 ntBASIC13.63□□□□□ -0.23
MRPL54Q6P161 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms