Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 VENTXP7-201ENST00000475503 772 ntBASIC21.76■■□□□ 1.07
RFX7Q2KHR2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 AL121912.1-201ENST00000603683 238 ntBASIC21.76■■□□□ 1.07
RFX7Q2KHR2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 TP73-AS1-207ENST00000624167 988 ntBASIC21.76■■□□□ 1.07
RFX7Q2KHR2 AC022898.2-201ENST00000616822 1312 ntBASIC21.76■■□□□ 1.07
RFX7Q2KHR2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 AP000997.3-201ENST00000623333 2250 ntBASIC21.76■■□□□ 1.07
RFX7Q2KHR2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
RFX7Q2KHR2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 NOC2LP2-201ENST00000407594 1944 ntBASIC21.75■■□□□ 1.07
RFX7Q2KHR2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 SAPCD2P3-201ENST00000455031 850 ntBASIC21.75■■□□□ 1.07
RFX7Q2KHR2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.75■■□□□ 1.07
RFX7Q2KHR2 KRT8P47-201ENST00000604727 1398 ntBASIC21.75■■□□□ 1.07
RFX7Q2KHR2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 MRPL3P1-201ENST00000400109 1033 ntBASIC21.74■■□□□ 1.07
RFX7Q2KHR2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.74■■□□□ 1.07
RFX7Q2KHR2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFX7Q2KHR2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms