Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GABREP78334 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.1■□□□□ 0.33
GABREP78334 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.1■□□□□ 0.33
GABREP78334 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.1■□□□□ 0.33
GABREP78334 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.1■□□□□ 0.33
GABREP78334 UNC93B6-202ENST00000528242 690 ntBASIC17.1■□□□□ 0.33
GABREP78334 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.1■□□□□ 0.33
GABREP78334 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
GABREP78334 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
GABREP78334 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.1■□□□□ 0.33
GABREP78334 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 AP002414.3-201ENST00000589352 1468 ntBASIC17.1■□□□□ 0.33
GABREP78334 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.1■□□□□ 0.33
GABREP78334 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABREP78334 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.09■□□□□ 0.33
GABREP78334 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.09■□□□□ 0.33
GABREP78334 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
GABREP78334 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GABREP78334 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GABREP78334 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.09■□□□□ 0.33
GABREP78334 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.09■□□□□ 0.33
GABREP78334 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.09■□□□□ 0.33
GABREP78334 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.09■□□□□ 0.33
GABREP78334 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.09■□□□□ 0.33
GABREP78334 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.09■□□□□ 0.33
GABREP78334 AC002347.1-201ENST00000569543 541 ntBASIC17.09■□□□□ 0.33
GABREP78334 NKAPP1-205ENST00000585790 367 ntBASIC17.09■□□□□ 0.33
GABREP78334 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.09■□□□□ 0.33
GABREP78334 AC107918.4-202ENST00000641623 219 ntBASIC17.09■□□□□ 0.33
GABREP78334 AC134684.3-201ENST00000641758 218 ntBASIC17.09■□□□□ 0.33
GABREP78334 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.09■□□□□ 0.33
GABREP78334 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.09■□□□□ 0.33
GABREP78334 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GABREP78334 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
GABREP78334 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABREP78334 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
GABREP78334 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
GABREP78334 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GABREP78334 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GABREP78334 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.08■□□□□ 0.33
GABREP78334 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GABREP78334 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 MYLKP1-201ENST00000509077 1580 ntBASIC17.08■□□□□ 0.32
GABREP78334 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.08■□□□□ 0.32
GABREP78334 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.08■□□□□ 0.32
GABREP78334 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.08■□□□□ 0.32
GABREP78334 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.08■□□□□ 0.32
GABREP78334 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.08■□□□□ 0.32
GABREP78334 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.08■□□□□ 0.32
GABREP78334 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.08■□□□□ 0.32
GABREP78334 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.08■□□□□ 0.32
GABREP78334 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.08■□□□□ 0.32
GABREP78334 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.08■□□□□ 0.32
GABREP78334 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.08■□□□□ 0.32
GABREP78334 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.08■□□□□ 0.32
GABREP78334 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GABREP78334 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.07■□□□□ 0.32
GABREP78334 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.07■□□□□ 0.32
GABREP78334 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.07■□□□□ 0.32
GABREP78334 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GABREP78334 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.07■□□□□ 0.32
GABREP78334 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
GABREP78334 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GABREP78334 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
GABREP78334 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GABREP78334 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GABREP78334 AP000974.1-201ENST00000623909 2387 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms