Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATXN3P54252 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ATXN3P54252 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ATXN3P54252 AC106820.2-201ENST00000563775 3264 ntBASIC18.43■□□□□ 0.54
ATXN3P54252 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ATXN3P54252 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.43■□□□□ 0.54
ATXN3P54252 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.43■□□□□ 0.54
ATXN3P54252 AC104692.2-201ENST00000603054 253 ntBASIC18.43■□□□□ 0.54
ATXN3P54252 AC138894.3-201ENST00000603787 634 ntBASIC18.43■□□□□ 0.54
ATXN3P54252 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 IGHV3-41-201ENST00000613121 348 ntBASIC18.43■□□□□ 0.54
ATXN3P54252 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.43■□□□□ 0.54
ATXN3P54252 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.43■□□□□ 0.54
ATXN3P54252 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.43■□□□□ 0.54
ATXN3P54252 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ATXN3P54252 ZNF815P-204ENST00000434898 1737 ntBASIC18.43■□□□□ 0.54
ATXN3P54252 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATXN3P54252 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.42■□□□□ 0.54
ATXN3P54252 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 AC090616.6-201ENST00000582640 721 ntBASIC18.42■□□□□ 0.54
ATXN3P54252 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
ATXN3P54252 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 AC068880.1-201ENST00000507289 2297 ntBASIC18.42■□□□□ 0.54
ATXN3P54252 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATXN3P54252 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.42■□□□□ 0.54
ATXN3P54252 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.41■□□□□ 0.54
ATXN3P54252 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.41■□□□□ 0.54
ATXN3P54252 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATXN3P54252 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.41■□□□□ 0.54
ATXN3P54252 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.41■□□□□ 0.54
ATXN3P54252 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.41■□□□□ 0.54
ATXN3P54252 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.41■□□□□ 0.54
ATXN3P54252 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 AP002469.2-201ENST00000531724 424 ntBASIC18.41■□□□□ 0.54
ATXN3P54252 AC074051.2-201ENST00000565115 352 ntBASIC18.41■□□□□ 0.54
ATXN3P54252 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ATXN3P54252 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.41■□□□□ 0.54
ATXN3P54252 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.41■□□□□ 0.54
ATXN3P54252 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATXN3P54252 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.41■□□□□ 0.54
ATXN3P54252 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 Z83836.1-201ENST00000624605 1642 ntBASIC18.41■□□□□ 0.54
ATXN3P54252 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATXN3P54252 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms